Seqera

Accelerating Innovation: Inside the Genomics England Hackathon 2025

Last month, Seqera hosted a hackathon with Genomics England, bringing together bioinformaticians and Nextflow experts to tackle real-world challenges and enhance workflow capabilities. Over 2 days, teams tackled several critical projects, from following nf-core best practices to converting legacy WDL variant calling pipelines to Nextflow. The goal was to accelerate development, build technical confidence, and embed best practices across Genomics England.

Rike Hanssen

Adam Talbot

Harshil Patel

Rike Hanssen, Adam Talbot & Harshil Patel

Replatforming Science: Software as a Strategic Lever in Modern Pharma R&D

The pharmaceutical industry stands at a pivotal moment. Organizations now find themselves constrained, not by the science, but by the software and systems supporting it. Here, I’ll outline five major shifts redefining how biopharma teams are scaling their research operations, and why these changes are shaping scientific performance, collaboration, and long-term agility.

Evan Floden

Seqera AI: Pipeline Mode, SRA Search, GitHub Integration, and the Nextflow VS Code Extension

We’ve introduced powerful new enhancements to Seqera AI that elevate how you build, understand, and optimize Nextflow pipelines. Whether you’re starting from scratch or refining complex workflows, Seqera AI delivers deeper insight and smarter automation at every step of the development lifecycle. In this blog post, we highlight what’s new with Seqera AI.

Sasha Dagayev

Scaling the Future of Scientific Software: Seqera Raises $26M Series B

Today, we're ecstatic to announce that Seqera has raised $26 million in Series B funding, led by Addition with participation from Speedinvest, Talis, Amino Collective, BoxOne, and SNR. This milestone marks a bold step forward in our mission to build the world’s most indispensable software-first platform for bioinformatics and life science R&D.

Evan Floden

Seqera Achieves SOC 2 Type II Attestation

We’re excited to share that Seqera is now SOC 2 Type II attested—a significant milestone in our ongoing commitment to security, trust, and compliance.

Arnau Alcázar Lleopart

Arnau Alcázar Lleopart

Bringing Seqera AI to the Nextflow VS Code extension

We are excited to announce a powerful new GitHub Copilot integration within the Nextflow VS Code extension. Workflow development has never been faster or more intuitive.

Sasha Dagayev

Shifting Paradigms: Considerations for the Scientific Data Lifecycle

Today, sequencing and imaging is faster, cheaper, and more accessible than ever. Research is no longer constrained by what we can sequence, but by what we can meaningfully deduce, forcing a paradigm shift in how we approach computation, storage, and interpretation.

Evan Floden

From legacy scripts to ready-to-run Nextflow pipelines with Seqera AI

Bioinformaticians often develop unique, in-house workflows using common workflow languages —such as Bash, Python, and R—choosing the one that best aligns with their project requirements, datasets, and computational resources.

Sasha Dagayev

Running AI workloads on Seqera: Maximizing computational resources with mixed GPU and CPU environments

Discover how Seqera Platform’s Batch Forge simplifies the process of creating versatile hybrid compute environments, letting you harness the power of both CPU and GPU instances on the cloud, all optimized for Nextflow workflows.

Rike Hanssen

Rob Syme

Rike Hanssen & Rob Syme

5 Product Announcements You Won’t Want to Miss from Nextflow Summit Barcelona

At the Nextflow Summit in Barcelona last month, we announced some exciting product updates to further our mission to advance science for everyone through software. Here are five key product announcements from the Nextflow Summit that you won’t want to miss!

Elizabeth Bolitho

Elizabeth Bolitho

Step-by-Step Series: Protein structure prediction in Seqera

Last month, the developers of AlphaFold2 were awarded the 2024 Nobel Prize in Chemistry. Did you know you can easily perform 3D protein structure prediction analysis using AlphaFold2 and other AI models in Seqera?

Llewellyn van der Berg

Llewellyn van der Berg

Empowering scientific discovery through AI innovation

At Seqera, we believe that AI isn’t just a tool - it’s the future of scientific discovery. We're committed to harnessing its transformative power to revolutionize the Life Sciences.

Evan Floden

Step-by-Step Series: RNA-Seq analysis in Seqera

We are excited to launch our new Step-by-Step blog series on running Nextflow pipelines in Seqera Platform. With accompanying technical guides, the series also demonstrates how to create and configure environments for flexible tertiary analysis and troubleshooting with Studios.

Llewellyn van der Berg

Llewellyn van der Berg

Bioinformatics events you can’t miss in fall 2024 and early 2025

Get ready to mark your calendars because the fall of 2024 is going to be jam-packed with amazing opportunities to expand your knowledge, make new connections, and stay at the forefront of bioinformatics!

Irina Silva

Seqera acquires tinybio to Advance Science for Everyone - Now Through GenAI!

AnnouncementSeqera

We are thrilled to announce that Seqera is joining forces with tinybio, a NYC-based tech-bio start-up known for its AI-integrated scientific tools focused on executing pipelines and analyses via natural language.

Evan Floden

Seqera's project on the optimization of computational resources for HPC workloads in the cloud through ML/AI has been funded by the European Union

SeqeraAnnouncement

Call for grants 2021 aimed at R&D Projects in AI and other digital technologies and their integration into value chains

Teresa Villoslada

Teresa Villoslada

Empowering scientists with seamless access to bioinformatics resources

Today marks a major milestone in that journey as we release two new free and open resources for the community: Seqera Pipelines and Seqera Containers.

Evan Floden

nf-core/riboseq: A collaboration between Altos Labs and Seqera

NextflowSeqeranf-core

This is a joint article contributed to the Seqera blog by Jon Manning of Seqera and Felix Krueger of Altos Labs describing the new nf-core/riboseq pipeline.

Jon Manning

7 tips for reducing your Nextflow cloud spend

An updated look at best practices for managing cloud spending with Nextflow and the Seqera platform.

Evan Floden

Singularity Reloaded

Improved Singularity/Apptainer support in Nextflow and Wave.

Marco De La Pierre

Marco De La Pierre

Element Biosciences and Seqera – Flexible, powerful, end-to-end analysis at scale

Automating NGS data analysis in the cloud ElemBio cloud and Seqera

Harshil Patel

Fusion file system and Mountpoint for Amazon S3 – understanding the differences

When processing bioinformatics datasets, having the right file system is essential. Read our in-depth article and learn why the Fusion file system is uniquely suited to large-scale analysis.

Jordi Deu Pons

Seqera at ASHG 2023

Seqera presents a poster on large-scale data analysis pipelines.

Noel Ortiz

Seqera and AWS Fargate

Reduce startup times for Nextflow pipelines.

Gord Sissons

Introducing Data Explorer

Simplified data management for Nextflow pipelines.

Drew DiPalma