Sep 25, 2023 | Episode 23
Clever containers: Wave & Wavelit
Paolo Di Tommaso gives us the rundown on Wave containers.Watch now
Paolo Di Tommaso gives us the rundown on Wave containers. We talk about how wave makes pipelines faster and more secure, all with simpler & cleaner code!
In this episode of the Channels podcast, it’s all about developer experience! We chat about debugging, error messages and language servers.
Ever wanted to peer inside Nextflow as it runs your pipeline? We play with an interactive debugger to do just that. Also, a first peek at a new Nextflow Ambassador program!
Evan Floden and Harshil Patel discuss reproducible compute with the Tower CLI and new data tools on the Seqera road map.
We discuss task provenance, cloud cache databases and task grouping.
Rob Syme tells us about new Nextflow training material and opportunities to learn Nextflow in 2023.
Ben Sherman tells us about future improvements to Nextflow syntax for processes.
Join us as we discuss the new nf-validation Nextflow plugin and talk nf-core components: modules and subworkflows.
We talk to Nextflow developer Ben Sherman about some exciting new features coming soon to Nextflow: a new CLI v2 interface; submission of job arrays and intermediate file cleanup during runs.
Welcome back to the Summer 2023 series of the Channels Podcast! In this episode we kick things off with some of the highlights from the latest Nextflow releases. There were a lot of goodies in there..
Phil Ewels, Paolo Di Tommaso and Evan Floden look back on 10 years of scientific workflows.
S3 file names, Spack package manager support and local hackathon sites.
The Sarus container engine, staging outputs and the GITHUB_TOKEN.
The Flux executor, bytesize transcripts and improved error messaging.
Updates to the Nextflow language and putting ML pipelines to good use..
nf-test, mentorships and debugging resume
Pathogens, Bactopia and awesome shirts
An introduction to the News and Views episode format.
In this Podcast, Rob Lalonde of Seqera speaks with Dr. Evan Floden, CEO and co-founder of Seqera. Rob and Evan talk about the history of Nextflow, breaking bad, and the future of bioinformatics. Evan also provides a live demo of Nextflow Tower.
Seqera speaks with Cedric Notredame of the CRG about cloud, pipelines, and the evolution of Nextflow from its early days.
Inside a Bioinformatics Startup – with NextRNA Therapeutics.
Seqera speaks to Nils Homer of Fulcrum Genomics about the bioinformatics industry, advances in technology and tools, and coming industry developments.
In this Podcast, Rob Lalonde speaks with Phil Ewels of SciLifeLab Sweden, part of NGI Stockholm. In this fascinating discussion, they cover everything from nf-core to future bioinformatics challenges.