The Platform for Scalable Genomics

Manage, validate, and scale omics research with Seqera—the platform built for the scientific data lifecycle. Designed for bioinformatics, trusted by enterprises.

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Accelerate Genomics with Scalable Bioinformatics

Genomics research is generating unprecedented volumes of data, from whole genome sequencing to single-cell transcriptomics. To keep pace, bioinformaticians need powerful, scalable tools for efficient and reproducible data analysis. Built for enterprise-scale, Seqera is the comprehensive platform for collaborative, end-to-end omics analysis—accelerating the path from raw data to real-world impact.

RNA sequencing analysis

RNA sequencing analysis

Chromatin accessibility profiling

Chromatin accessibility profiling

Viral genome assembly

Viral genome assembly

Amplicon sequencing

Amplicon sequencing

Differential abundance analysis

Differential abundance analysis

DNA methylation analysis

DNA methylation analysis

ChIP-seq peak calling

ChIP-seq peak calling

Metagenome assembly

Metagenome assembly

Why Seqera for Genomics?

Seqera enables organizations to operationalize genomics at scale, accelerating analysis, improving reproducibility, and reducing infrastructure complexity. From sequencing to interactive insights, Seqera provides the enterprise-grade foundation to deploy, manage, and scale high-throughput bioinformatics across research, translational, and clinical domains.

Effortless Genomic Scaling

Effortless Genomic Scaling

Dynamically scale analysis capacity with seamless access to your data, cloud, and compute—without infrastructure limitations or vendor lock-in. Built to scale from proof-of-concept to global R&D.

Deploy Genomics Anywhere

Deploy Genomics Anywhere

Run large-scale genomics workloads on any cloud, on-premises, or hybrid environment with flexible deployment options that meet your IT and regulatory needs.

Seamless Collaboration

Seamless Collaboration

Break down silos across global teams and partners with real-time collaboration and secure sharing of data, analyses, and results, enabling rapid cross-validation of findings and faster decision-making.

Reproducibility Without Compromise

Reproducibility Without Compromise

Leverage Nextflow and nf-core to automate and standardize genomics analyses, ensuring full traceability, consistency, and reproducibility from development to production.

From the Creators of Nextflow

From the Creators of Nextflow

Receive expert support directly from the team behind Nextflow, with professional bioinformaticians guiding you through onboarding, optimization, and long-term innovation.

Enterprise-Grade Security & Compliance

Enterprise-Grade Security & Compliance

Integrate seamlessly with your infrastructure while meeting enterprise security, compliance, and data governance needs and ensuring sustainability for future growth.

How Seqera is Powering Genomics

Seqera centralizes data, code, computing, and environments, giving scientists seamless access to best-practice pipelines from organizations including nf-core, Sanger, and other top institutions on a single, scalable platform. By automating and optimizing workflows, Seqera reduces infrastructure challenges, lowers costs, and accelerates large-scale genomic analysis.

Launch Analysis in One Click

Get started instantly with trusted, open-source Nextflow pipelines from the nf-core community, or bring your own.

nf-core/rnaseq

https://github.com/nf-core/rnaseq

RNA-seq analysis using STAR, RSEM, HISAT2 or Salmon

Nextflownf-corerna

nf-core/atacseq

https://github.com/nf-core/atacseq

ATAC-seq peak-calling and QC analysis

atac-seqnextflow

nf-core/viralrecon

https://github.com/nf-core/viralrecon

Assembly and intrahost/low-frequency variant calling for viral samples

nf-corenextflow

nf-core/ampliseq

https://github.com/nf-core/ampliseq

Amplicon sequencing analysis workflow using DADA2 and QIIME2

nextflowillumina

nf-core/differentialabundance

https://github.com/nf-core/differentialabundance

Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq

nextflowshiny

nf-core/methylseq

https://github.com/nf-core/methylseq

Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel

pbatem-seq

nf-core/chipseq

https://github.com/nf-core/chipseq

ChIP-seq peak-calling, QC and differential analysis pipeline.

nf-corechip-seq

nf-core/mag

https://github.com/nf-core/mag

Assembly and binning of metagenomes

workflownanopore

Discover Real-World Applications

Explore applications of Nextflow and Seqera in omics research with these useful resources.

Trusted by 150+ Leading Organizations

Pharma and biotech companies, academia, and national sequencing initiatives rely on Nextflow and Seqera to power their genomics research. From Biopharma R&D and Clinical Diagnostics, to large-scale consortia projects to precision medicine studies, Seqera delivers the computational backbone for groundbreaking discoveries.

Pharma

"By streamlining our single-cell assay workflows, we reduced execution time by 24%"

Clinical Diagnostics

"We have scaled our pathogen genomic surveillance capacity by 10 times"

Biotech

"We were able to scale single-cell genomics to deliver clinical impact at industry-leading costs"

Life Sciences R&D

"Seqera provided us with huge flexibility to deploy genomics workloads anywhere"

Start Accelerating Your Genomics TodayExplore how Seqera can enhance your genomics workflows. Contact us for a demo or get started with a free trial today.