Transform Protein Research with Scalable Precision
From experimental protein data to interactive exploration and scientific insights, Seqera enables faster, reproducible analysis at scale. Accelerate discovery. Engineer breakthroughs.
Request a DemoStreamline Protein Analysis with Scalable Bioinformatics
Protein engineering is at the forefront of biomedical innovation, driving the development of novel therapeutics, enzymes, and biomaterials. From rational protein design to high-throughput structural analysis, Seqera provides the computational infrastructure and flexibility needed to accelerate and scale protein analysis workflows.
Protein structure prediction
Quantitative mass spectrometry
Peptidomics data processing
Label-free protein quantification
Epitope prediction analysis
Ortholog comparative analysis
AI-driven structure modeling
Proteome differential expression
Why Seqera for Protein Research?
Seqera empowers researchers to accelerate computational protein engineering and analysis through automated workflows, scalable infrastructure, and built-in collaboration. Whether you’re predicting protein structures, screening protein sequences, or utilizing AI models, Seqera provides a centralized platform to orchestrate proteomics analysis at scale.

Scalable Protein Workflows
Run large-scale protein analyses without infrastructure constraints—dynamically scale up or down based on workload demands, without compromising cost or performance.
Run Protein Analysis Anywhere
Whether you're screening thousands of variants or running molecular dynamics simulations, execute complex protein workflows on any cloud, on-premises, or hybrid environment with ease.

Collaborative Research, Unified Insights
Break down silos by centralizing analysis, enabling real-time collaboration and cross-validation of findings for faster, more informed decisions across global teams.

Reliable Results, Every Run
Automate and standardize protein workflows with Nextflow and nf-core to ensure full reproducibility, traceability, and scientific rigor from development to production.

From the Creators of Nextflow
Access expert support from the team defining the Nextflow ecosystem—trusted partners who understand the demands of protein analysis and engineering at scale.

Built-In Compliance, Ready to Scale
Confidently align with enterprise-grade security and governance standards while integrating seamlessly into your existing systems, laying the foundation for long-term growth.
How Seqera is Powering Protein Research
Seqera unifies data, tools, and compute into a single comprehensive platform, enabling scientists to run complex end-to-end protein analyses with ease. By streamlining workflows, Seqera reduces operational overhead, lowers compute costs, and provides the flexibility to perform scalable protein data analysis, from early discovery to clinical research.
Launch Protein Analysis in One Click
Get started instantly with trusted, community-curated Nextflow pipelines from the nf-core community, or bring your own.
Discover real-world applications of Seqera
Explore applications of Nextflow and Seqera in protein research with these useful resources.
Trusted by 150+ Leading Organizations
From structural biology labs to biopharma innovators, researchers across the globe depend on Nextflow and Seqera to accelerate protein science. Whether it’s proteomics, target discovery, or enzyme design, Seqera provides the scalable infrastructure to power innovation at every stage of protein research.
Clinical Research
"Seqera makes it easy for research, clinicians, and stakeholders to collaborate during clinical trials."
