Scale Image-Based Discovery with Confidence
From multiplex imaging and brain scans to spatial biology and earth observation, Seqera simplifies image analysis workflows—scaling effortlessly to handle terabytes of complex data.
Request a DemoStreamline Image Analysis with Scalable Infrastructure
Scientific imaging is exploding in both scale and complexity. From spatial transcriptomics and single-cell imaging to digital pathology and satellite data, researchers are generating massive datasets that require robust, high-performance compute. Seqera provides the infrastructure to transform these complex image datasets into meaningful insights faster, and more efficiently.
High throughput microscopy
Image segmentation and modelling
Diffusion MRI and medical imaging
Satellite image analysis
Molecular cartography
Single-cell spatial profiling
Electron microscopy reconstruction
Whole-slide pathology analysis
Why Seqera for Image-Based Research?
Seqera enables researchers to run and scale image analysis workflows without bottlenecks—no more time wasted moving data or managing infrastructure. Whether you're segmenting cells from multiplex images or quantifying brain imaging data, Seqera supports every step, from orchestration to collaborative review.
Scale Complex Imaging Workflows
Process and analyze terabytes of imaging data without infrastructure bottlenecks. Seqera scales across environments, unlocking performance for even the most data-intensive workloads.
Imaging Analysis, Anywhere
Whether you're segmenting pathology slides in the lab or analyzing spatial data on your laptop, Seqera supports seamless execution across cloud, on-prem, and hybrid environments.
Unified Data, Faster Insights
Eliminate the need to move massive image datasets across systems. Seqera brings compute to your data, accelerating the entire image analysis lifecycle from raw acquisition through visualization and interpretation.
Reproducibility Across Teams
Ensure traceable, consistent results across diverse imaging modalities and collaborative teams. With containerized, version-controlled workflows powered by Nextflow, Seqera enables scientific rigor at scale.
Collaborate and Cross-Validate
Centralize workflows, environments, and outputs for real-time collaboration across disciplines and institutions. Share live pipeline results via secure links, enabling faster review cycles and collaborative insights.
Security and Compliance, Built-in
Operate imaging workflows at scale with confidence. Seqera integrates seamlessly into your infrastructure while supporting enterprise-grade governance, access control, and regulatory readiness.
How Seqera is Transforming Imaging Analysis
Seqera connects data, compute, and imaging pipelines into a single platform—enabling teams to manage large, complex imaging datasets, automate preprocessing, and rapidly iterate on new analysis methods. With built-in support for GPUs, scalable infrastructure, and containerized environments, Seqera eliminates bottlenecks in image analysis, accelerating the time to insights.
Launch Imaging Analysis in One Click
Get started instantly with trusted, community-curated Nextflow pipelines from the nf-core community, or bring your own.
Discover real-world applications of Seqera
Explore imaging applications of Nextflow and Seqera with these useful resources.
Trusted by 150+ Leading Organizations
As researchers face growing demands for large-scale, reproducible image analysis, Seqera delivers the scalable infrastructure needed to meet this challenge. With adoption across biotech, pharma, and agritech, we’re partnering with research teams to bring the same flexibility, traceability, and performance to image-based research—from discovery to clinical validation.
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