The Nextflow Podcast
by Seqera
Dive into the world of scientific innovation and data-driven research with The Nextflow Podcast by Seqera. Each episode features insightful discussions with leading experts, practitioners, and thought leaders who share their experiences, challenges, and breakthroughs in the Nextflow ecosystem.
All podcasts
Nextflow Summit Barcelona 2024 Highlights
A selection of the juciest snippets by a big bunch of Seqera folks.
New Nextflow language server & VS Code extension
Take your developer experience to the next level.
Nextflow meets WDL: Comparing modern workflow languages
Exploring what Nextflow can learn from WDL
tinybio: Nextflow x AI
GenAI for bioinformatics
Regulatory revolution
How open source software can make a difference in pharma and clinical settings.
Data Studios
Iterative Nextflow development in the cloud & tertiary analysis.
Nextflow on the Road — ISMB 2024 in Montreal
Conference highlights and team impressions from ISMB 2024.
New syntax in Nextflow 24.04.
Workflow output definitions, topics, eval and more.
Origins of nf-core - SciLifeLab NGI
All about Sarek and bytesize talks
Spatial proteomics at Pixelgen
Meet nf-core/pixelator - the Molecular Pixelation pipeline
Seqera Pipelines & Seqera Containers
Talking about new community projects from Seqera and how they can help bioinformaticians
New nf-core / EuroFAANG pre-print
Discussion about this new manuscript and how it came about with some of the key authors.
The Nextflow Ambassadors Program
A closer look at the Ambassadors program's origins, recent highlights and next steps.
Nextflow plugins: development walkthrough
A walk through of how to create and publish a plugin from scratch.
Nextflow in materials science: Jakob Zeitler
We speak to Jakob from Matterhorn Studio about how they use Nextflow and Seqera Platform in materials science research.
GA4GH interoperability standards and Nextflow
Hear about GA4GH and its efforts to develop interoperability standards for pipelining infrastructure.
Interview: Josh Chorlton
Infra and backend for Nextflow and MultiQC in clinical practice.
Learning Nextflow in 2024
A recap of our current training formulas, how we got here and where we’re heading to next.
Fusion file system
Super-fast data access for Nextflow pipelines
Nextflow 2023 - 2024
We recap some of the biggest features to be added to Nextflow in 2023 and take a look at some of the things coming in 2024.
Seqera and Nextflow in public health
Rob Lalonde interviews Kelsey Florek about using Nextflow, nf-core pipelines and Seqera platform for genomic surveillance in public health labs.
2023: Year in review
What happened this year in the Nextflow world, with particular emphasis on the many exciting developments in nf-core.
Code & community at the 2023 nf-core hackathon
Hear from participants of the nf-core hackathon discussing their work and the value of community
Interview: Geraldine Van der Auwera
Meet Geraldine Van der Auwera, the latest addition to the community team at Seqera!
Nextflow runtime updates: Requesting resources
Today in the Channels podcast, we're talking about computing resources.
Clever containers: Wave & Wavelit
Paolo Di Tommaso gives us the rundown on Wave containers. We talk about how wave makes pipelines faster and more secure, all with simpler & cleaner code!
Nextflow language updates: Better error messages
In this episode of the Channels podcast, it’s all about developer experience! We chat about debugging, error messages and language servers.
Live debugging Nextflow, Ambassadors & Training
Ever wanted to peer inside Nextflow as it runs your pipeline? We play with an interactive debugger to do just that. Also, a first peek at a new Nextflow Ambassador program!
Tower CLI, infrastructure as code and some Seqera road map previews
Evan Floden and Harshil Patel discuss reproducible compute with the Tower CLI and new data tools on the Seqera road map.
Nextflow runtime updates: Talking tasks
We discuss task provenance, cloud cache databases and task grouping.
Learning Nextflow in 2023
Rob Syme tells us about new Nextflow training material and opportunities to learn Nextflow in 2023.
Nextflow language updates: Power to the processes
Ben Sherman tells us about future improvements to Nextflow syntax for processes.
Infrastructure team: nf-validation and nf-core components
Join us as we discuss the new nf-validation Nextflow plugin and talk nf-core components: modules and subworkflows.
Coming soon to Nextflow: From command-line to cleanup
We talk to Nextflow developer Ben Sherman about some exciting new features coming soon to Nextflow: a new CLI v2 interface; submission of job arrays and intermediate file cleanup during runs.
Summer podcast season, Nextflow release highlights.
Welcome back to the Summer 2023 series of the Channels Podcast! In this episode we kick things off with some of the highlights from the latest Nextflow releases. There were a lot of goodies in there..
Nextflow turns 10!
Phil Ewels, Paolo Di Tommaso and Evan Floden look back on 10 years of scientific workflows.
News and Views: S3 file names, Spack package manager support and local hackathon sites.
S3 file names, Spack package manager support and local hackathon sites.
News and Views: The Sarus container engine, staging outputs and the GITHUB_TOKEN
The Sarus container engine, staging outputs and the GITHUB_TOKEN.
News and Views: The Flux executor, bytesize transcripts and improved error messaging
The Flux executor, bytesize transcripts and improved error messaging.
News and Views: End of DSL1 and AI pipelines
Updates to the Nextflow language and putting ML pipelines to good use..
News and Views: nf-test, mentorships and debugging resume
nf-test, mentorships and debugging resume
Interview: Robert Petit
Pathogens, Bactopia and awesome shirts
News and Views: Introducing "Channels" the rebranded podcast
An introduction to the News and Views episode format.
Interview with Evan Floden, CEO and co-founder from Seqera
In this Podcast, Rob Lalonde of Seqera speaks with Dr. Evan Floden, CEO and co-founder of Seqera. Rob and Evan talk about the history of Nextflow, breaking bad, and the future of bioinformatics. Evan also provides a live demo of Nextflow Tower.
Interview with Cedric Notredame of Notredame Lab
Seqera speaks with Cedric Notredame of the CRG about cloud, pipelines, and the evolution of Nextflow from its early days.
Interview with Lorena Pantano of NextRNA
Inside a Bioinformatics Startup – with NextRNA Therapeutics.
Interview with Nils Homer of Fulcrum Genomics
Seqera speaks to Nils Homer of Fulcrum Genomics about the bioinformatics industry, advances in technology and tools, and coming industry developments.
Interview with Phil Ewels of SciLifeLab
In this Podcast, Rob Lalonde speaks with Phil Ewels of SciLifeLab Sweden, part of NGI Stockholm. In this fascinating discussion, they cover everything from nf-core to future bioinformatics challenges.