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nf-core/sarek

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
nextflowpipelineworkflownf-coregenomicsvariant-callingbioinformaticsannotationnext-generation-sequencingcondareproducible-researchcancercontainersgermlinesomaticgatk4whole-genome-sequencingwhole-exome-sequencingpre-processingtarget-panels
  • 340
  • 470 KB
  • Updated 8 months ago
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Run this pipeline using Seqera on top of your own compute.