Nextflow best practices: Leveraging nf-core tooling and standards within your organization

Recording available: Watch on-demand now! Duration: 1 hour.

Join us for a webinar about the guidelines,standards and tooling available from nf-core, a community effort to collaborate on best-practice analysis pipelines and components, built using Nextflow. You will get a taste of how you can quickly create a pipeline from scratch using freely available tools and components from the nf-core community, then deploy it on Seqera Platform.

This webinar is suitable for bioinformaticians and data scientists who are interested in standardizing their in-house pipeline development by adopting community standards.

Watch the webinar now

Watch the video below at your convenience. We will also send you the link via email, so you can access it anytime.

During this webinar you will:

  • Get an overview of nf-core: Learn about the nf-core framework and how you can adopt community standards within your organization when developing Nextflow pipelines
  • Watch a live demo: See how to create and deploy pipelines on Seqera Platform using free tools from the nf-core framework
  • Discover future updates: Preview upcoming features for nf-core and the Seqera Platform
  • Access the Q&A session: View the pre-recorded discussion with Nextflow experts and follow up with us if you have any questions

Speakers

Harshil Patel

Harshil Patel

Director of Scientific Development at Seqera
Harshil has a PhD in Bioinformatics and is an author on over 40 peer-reviewed publications. He has contributed 8 nf-core pipelines which are amongst the most widely used Nextflow pipelines worldwide. He leads a team of bioinformaticians to help Seqera's customers by streamlining their usage of Nextflow and nf-core pipelines via the adoption of Nextflow Tower.
Phil Ewels

Phil Ewels

PhD, Lead Developer Advocate at Seqera, nf-core co-founder
Phil holds a PhD in Molecular Biology from the University of Cambridge (UK) and has had a career that has spanned many disciplines: from lab work and bioinformatics research in epigenetics to software development and community engagement. He is the co-founder of the nf-core community and the author of several well-known bioinformatics tools, such as MultiQC. He leads a team within Seqera committed to growing the Nextflow and nf-core communities worldwide.

About Seqera

Nextflow has come a long way in the last few years, thanks in part to our community of users like you. The team behind Nextflow also provides a number of other tools, under the Seqera umbrella, designed to level up your nf pipelines.

  • Seqera Platform: Elevate your bioinformatics with a fully integrated, scalable suite that enhances collaboration, ensures robust compliance, and reduces operational costs, all supported by professional assistance. Run your Nextflow workflow with Seqera.
  • MultiQC: Open-source tool to aggregate bioinformatic analyses results with a consolidated view of key quality control metrics. For analysis pipelines written in Nextflow or other workflow languages.
  • Wave: Next generation container provisioning for data analysis. Develop faster and deliver efficiently. You can use it with Nextflow.
  • Fusion: Distributed, lightweight file system for cloud data pipelines that simplifies data management. Optimized for Nextflow.