FredHutch/subset-fastq-nf

Subset a collection of FASTQ files

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Updated about 2 years ago

README

Subset a collection of FASTQ files

    Usage:

    nextflow run FredHutch/subset-fastq-nf <args>

    Required Arguments:
        --input        # Path of FASTQ file(s) to analyze
                         multiple files are separated by commas
        --nreads       # Number of reads to keep from each file
        --outdir       # Folder to place output files

Launch Pipeline

Run this pipeline using Seqera on top of your own compute.